Stem-loop cfa-mir-8811

Accession

MI0027891

Description

Canis lupus familiaris cfa-mir-8811 precursor miRNA

Sequence

11 reads, 2.0 reads per million, 9 experiments

cacagcgaucuccaccuccuccgcaUCGUCGUCCUGCGUCAGCUGCUccugugagacacagagaggugaggcucagccgggacacucacggggaggggggaggagggag
........(((((.((((((((.(...((.(((((((.(((.((.(((.((((...))))))))).))).))......)))))))....).))))))))..)))))...

Structure

cacagcga     -a        g -aUC  C     ------  G   G  G   c    a 
        ucucc  ccuccucc c    GU GUCCU      GC UCA CU CUc ugug  
        |||||  |||||||| |    || |||||      || ||| || ||| |||| g
        ggagg  gggggagg g    ca caggg      cg agu ga gag acac  
-----gag     ag        g cacu  -     ccgacu  g   g  -   -    a 

Annotation confidence Not enough data

Genome context

21: 51483002-51483110 [-]

Mature cfa-miR-8811-5p

• Accession: MIMAT0034301
• Description: Canis lupus familiaris cfa-miR-8811-5p mature miRNA
• Sequence: 26 - UCGUCGUCCUGCGUCAGCUGCU - 47
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545