Stem-loop cfa-mir-8812

Accession

MI0027892

Description

Canis familiaris cfa-mir-8812 precursor miRNA

Sequence

ccccugcuuaacuggagccuuugagaguagcaucaUUUGAGUUCCAUCCCUAGGUCauucugauugaauugacuggagguggggcuuagguuuuggugcuuucuuacaugccccagaugauuguaac
....((((((.((((.((...((((((.((((((((((((((((((((((..((((((((.....))).))))))).)))))))))))))...)))))))))))))...)).)))).)))..)))..

Structure

cccc   --   a    a  cuu      u       ---             -  UA     -   u 
    ugc  uua cugg gc   ugagag agcauca   UUUGAGUUCCAUC CC  GGUCa uuc g
    |||  ||| |||| ||   |||||| |||||||   ||||||||||||| ||  ||||| ||| a
    aug  agu gacc cg   auucuu ucguggu   ggauucggggugg gg  ucagu aag u
--ca   uu   a    c  uac      -       uuu             a  --     u   u 

Annotation confidence Not enough data

Genome context

chr21: 6284255-6284381 [-]

Mature cfa-miR-8812

• Accession: MIMAT0034302
• Description: Canis familiaris cfa-miR-8812 mature miRNA
• Sequence: 36 - UUUGAGUUCCAUCCCUAGGUC - 56
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545