Stem-loop cfa-mir-8814

Accession

MI0027894

Description

Canis lupus familiaris cfa-mir-8814 precursor miRNA

Sequence

13 reads, 1.0 reads per million, 11 experiments

gccaugaucuucauuacuaauacucauaaucggucuuuagauucagugacugcuugaggugcaaagguccUUAGCAGUCAUUUAACUGAGCGCCUgguguuagucaugaagcacuggaucuggga
.(((.(((((((((.((((((((.((.....(((.(((((.((.((((((((((.((((.((....)))))))))))))))).))))))).))))))))))))).))))......))))))))..

Structure

-g   u     ------    u        u  uaauc   c     a  c          u    u  a 
  cca gaucu      ucau acuaauac ca     ggu uuuag uu agugacugcu gagg gc a
  ||| |||||      |||| |||||||| ||     ||| ||||| || |||||||||| |||| ||  
  ggu cuagg      agua ugauugug gU     CCG GAGUC AA UUACUGACGA UUcc ug a
ag   -     ucacga    c        -  -----   C     -  U          -    -  g 

Annotation confidence Not enough data

Genome context

22: 6227456-6227580 [+]

Mature cfa-miR-8814-3p

• Accession: MIMAT0034304
• Description: Canis lupus familiaris cfa-miR-8814-3p mature miRNA
• Sequence: 71 - UUAGCAGUCAUUUAACUGAGCGCCU - 95
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545