Stem-loop cfa-mir-8817

Accession

MI0027898

Description

Canis lupus familiaris cfa-mir-8817 precursor miRNA

Sequence

4 reads, 3.0 reads per million, 3 experiments

ugccuucacuucacaguuccuuugcuguguggcuggucccUUGAGAUAUUAGGUGGGauccauuuaguggaucccacucuugugauacuuggugguggugcugccugaggcccuguggggggaaaggga
..(((((.((((((((..((((.(....(((((....((.(((((.(((((((((((((((((...))))))))))))....)))))))))).))....)))))).))))..)))))))).).))))..

Structure

ug    - a        uu    u cugu     uggu  c     A     ----            u 
  ccuu c cuucacag  ccuu g    guggc    cc UUGAG UAUUA    GGUGGGauccau  
  |||| | ||||||||  |||| |    |||||    || ||||| |||||    |||||||||||| u
  ggaa g gggguguc  ggag c    cgucg    gg gguuc auagu    ucacccuaggug  
ag    a g        cc    u ----     uggu  u     -     guuc            a 

Annotation confidence Not enough data

Genome context

28: 38225689-38225817 [-]

Mature cfa-miR-8817-5p

• Accession: MIMAT0034307
• Description: Canis lupus familiaris cfa-miR-8817-5p mature miRNA
• Sequence: 41 - UUGAGAUAUUAGGUGGG - 57
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545