Stem-loop cfa-mir-8821

Accession

MI0027902

Description

Canis lupus familiaris cfa-mir-8821 precursor miRNA

Sequence

17 reads, 2.0 reads per million, 13 experiments

uacuuggcaaguuuggggauugauuuggacaacagUACUGUGUCCUCCUAUCCAUGGgugucugagccccauggugcaguggcauggggcagcuguugagcauguguggucccaaggcugccggacacu
...((((((.((((.((((((.((.((..(((((((....((((((.(((((((((((.((....)))))))))....))))...)))))))))))))..)).))..)))))).)))))))))).....

Structure

--uac      a    g      -g  u  ga       ACUG      --C    ----       u  c 
     uuggca guuu gggauu  au ug  caacagU    UGUCCU   CUAU    CCAUGGg gu u
     |||||| |||| ||||||  || ||  |||||||    ||||||   ||||    ||||||| ||  
     ggccgu cgga cccugg  ug ac  guugucg    acgggg   ggug    gguaccc cg g
ucaca      -    a      ug  u  ga       ----      uac    acgu       -  a 

Annotation confidence Not enough data

Genome context

25: 28651616-28651744 [-]

Mature cfa-miR-8821-5p

• Accession: MIMAT0034311
• Description: Canis lupus familiaris cfa-miR-8821-5p mature miRNA
• Sequence: 36 - UACUGUGUCCUCCUAUCCAUGG - 57
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545