Stem-loop cfa-mir-8822

Accession

MI0027903

Description

Canis familiaris cfa-mir-8822 precursor miRNA

Sequence

cugugggauggcugucggagccugcgauucggcgugugcgcugcugccaaaggccugggggcccUGGUUGGCUGGGCUUAUGCAGAGCuuggggccugucagagugacauugu
..(((..((..(((.(((.((((.((((((.(((((.((.(.(((((((..((((....)))).))).)))).).)).))))).))).)))))))))).))).))..)))...

Structure

-cu   gg  gg   u   a    g   -   g     u  g u    -   aa    u 
   gug  au  cug cgg gccu cga uuc gcgug gc c gcug cca  ggcc g
   |||  ||  ||| ||| |||| ||| ||| ||||| || | |||| |||  ||||  
   uac  ug  gac guc cggg guu GAG CGUAU CG G CGGU GGU  ccgg g
ugu   ag  -a   u   -    -   C   A     U  G U    U   -c    g 

Annotation confidence Not enough data

Genome context

chr25: 48871813-48871925 [+]

Mature cfa-miR-8822

• Accession: MIMAT0034312
• Description: Canis familiaris cfa-miR-8822 mature miRNA
• Sequence: 65 - UGGUUGGCUGGGCUUAUGCAGAGC - 88
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545