Stem-loop cfa-mir-8825

Accession

MI0027906

Description

Canis familiaris cfa-mir-8825 precursor miRNA

Sequence

gaaacugugggggaaaguauggccagcaucagcugcugccUUGCUAAUGGAUAGCCAGAAAGGGCugugugggcucucaguucaggcuuggauucuggaggcuagggucagcaugcuuuccuuccucccuggcuggacuugaccu
.........(((..((((..((((((....(((((((((((((((...((((((((.(((((((((.....))))))...))).))))...))))....))).)))).))))).)))...........))))))..))))..)))

Structure

gaaacugug   ga    au      -------cauc   -     -    -   -AAU    ---    A   ---      g 
         ggg  aagu  ggccag           agc ugcug ccUU GCU    GGAU   AGCC GAA   AGGGCu u
         |||  ||||  ||||||           ||| ||||| |||| |||    ||||   |||| |||   |||||| g
         ucc  uuca  ucgguc           ucg acgac ggga cgg    cuua   ucgg cuu   ucucgg u
---------   ag    gg      ccuccuuccuu   u     u    u   aggu    ggu    a   gac      g 

Annotation confidence Not enough data

Genome context

chr25: 9793701-9793845 [+]

Mature cfa-miR-8825

• Accession: MIMAT0034315
• Description: Canis familiaris cfa-miR-8825 mature miRNA
• Sequence: 41 - UUGCUAAUGGAUAGCCAGAAAGGGC - 65
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545