Stem-loop cfa-mir-8826

Accession

MI0027908

Description

Canis lupus familiaris cfa-mir-8826 precursor miRNA

Sequence

834 reads, 8.0 reads per million, 41 experiments

gcagcaggauccuggcugggUCUGGACUUCAGGAGACAGCUuggucauccgcacagagcuggcguuugaaauccugagccugacgggauucucaaag
.....(((((((((...((.((.(((.((((((.(.((((((.(((....).)).)))))).).)))))).))).)).))...))))))))).....

Structure

gcagc         gcu  g  U   C      A A      g  - a 
     aggauccug   gg UC GGA UUCAGG G CAGCUu gu c u
     |||||||||   || || ||| |||||| | |||||| || |  
     ucuuagggc   cc ag ccu aaguuu c gucgag ca g c
gaaac         agu  g  u   a      g g      a  c c 

Annotation confidence Not enough data

Genome context

10: 41231872-41231968 [-]

Mature cfa-miR-8826-5p

• Accession: MIMAT0034317
• Description: Canis lupus familiaris cfa-miR-8826-5p mature miRNA
• Sequence: 21 - UCUGGACUUCAGGAGACAGCU - 41
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545