miRBase entry: cfa-mir-8830-2

Stem-loop cfa-mir-8830-2

Accession

MI0027915

Description

Canis familiaris cfa-mir-8830-2 precursor miRNA

Sequence

ccggcuucccUCGUCGCUGAGGCAGGACCGACUUCccucauggccgaggcaggaccggcuucccucauggccgaggcagacccgg
((((.((.((((((((.(((((.(((.(((.(((.((((......)))).)))..)))))).)))))))).)))))..)).))))

Structure

    c  -c     -   C     C   A   -A   C    au 
ccgg uu  ccUCG UCG UGAGG AGG CCG  CUU ccuc  g
|||| ||  ||||| ||| ||||| ||| |||  ||| ||||   
ggcc ag  ggagc ggu acucc uuc ggc  gga ggag  g
    c  ac     c   -     c   -   ca   c    cc

Annotation confidence Not enough data

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Genome context

chr11: 14017075-14017159 [-]

Clustered miRNAs

2 other miRNAs are < 10 kb from cfa-mir-8830-2

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature cfa-miR-8830

Accession	MIMAT0034323
Description	Canis familiaris cfa-miR-8830 mature miRNA
Sequence	11 - UCGUCGCUGAGGCAGGACCGACUUC - 35
Evidence	experimental Illumina [1]

References

PubMed ID: 24692655
Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
"Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
"Mol Biol Evol (2014) 31:1536-1545