Stem-loop cfa-mir-8833

Accession

MI0027919

Description

Canis familiaris cfa-mir-8833 precursor miRNA

Sequence

ggggcugacgcugagcugggggccccggagccgcagacggggggucgggcaucgucggagucgguggggaugacgacUGACUUCGACUGCCCGACAGCCccuggggccuucaucccuacauccucggacagccucagcc
(((((((...(((((.((((((((((((..(((....)))(((((((((((..((((((((((((.(......).))))))))))))))))))))..)))))))))))))))..........))))).)))))))....

Structure

----       acg     ---------c            agccgcagacgg   --        uc            g gg 
    ggggcug   cugag          ugggggccccgg            ggg  gucgggca  gucggagucggu g  a
    |||||||   |||||          ||||||||||||            |||  ||||||||  |||||||||||| |   
    cuccgac   ggcuc          acuuccgggguc            cCC  CAGCCCGU  CAGCUUCAGUca c  u
ccga       --a     cuacaucccu            ------------   GA        --            g ag 

Annotation confidence Not enough data

Genome context

chr12: 48374871-48375009 [+]

Mature cfa-miR-8833

• Accession: MIMAT0034326
• Description: Canis familiaris cfa-miR-8833 mature miRNA
• Sequence: 78 - UGACUUCGACUGCCCGACAGCC - 99
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545