Stem-loop cfa-mir-8834a-1

Accession

MI0027920

Description

Canis familiaris cfa-mir-8834a-1 precursor miRNA

Sequence

aggagcuacagcccuaguggcggggccagcucuggaaaccuggauucagcucuggcaggaacuccggagcucuccgucUGCCGGGCCUGGAGGCUCCGGGGcggggccgcugaucugcucagcuggggcaggagcguccuc
(((((((...(((((((((((((((((.((((((((..(((....((((.(((((((((.....((((....))))))))))))).))))))).))))))))..))))......)))))..))))))))...))).)))).

Structure

-    -   aca        --     ------    -a        aa   ggau    c         aacuc    g 
 agga gcu   gcccuagu  ggcgg      ggcc  gcucugga  ccu    ucag ucuggcagg     cgga c
 |||| |||   ||||||||  |||||      ||||  ||||||||  |||    |||| |||||||||     ||||  
 uccu cga   cggggucg  ucguc      ccgg  cGGGGCCU  GGA    GGUC GGGCCGUcu     gccu u
c    g   gga        ac     uagucg    gg        -C   ----    C         -----    c 

Annotation confidence Not enough data

Genome context

chr12: 40720025-40720165 [+]

Mature cfa-miR-8834a

• Accession: MIMAT0034327
• Description: Canis familiaris cfa-miR-8834a mature miRNA
• Sequence: 79 - UGCCGGGCCUGGAGGCUCCGGGG - 101
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545