Stem-loop cfa-mir-8841-1

Accession

MI0027927

Description

Canis lupus familiaris cfa-mir-8841-1 precursor miRNA

Sequence

146 reads, 8.0 reads per million, 16 experiments

uuggacUUCAGGGGUACUUGAAGGuucagcuggggccuccugugggcuuacagaauuuccagcuUCCUUAAGGAUCUCUGGAGGCUgagauagag
((((.((((((((((.(((.((((...((((((((....(((((....)))))...)))))))).)))).))))))))))))).)))).......

Structure

-------    a          A   G    uuc        ccuc     g 
       uugg cUUCAGGGGU CUU AAGG   agcugggg    cugug g
       |||| |||||||||| ||| ||||   ||||||||    |||||  
       agUC GAGGUCUCUA GGA UUCC   ucgaccuu    gacau c
gagauag    G          -   A    --U        -uaa     u 

Annotation confidence Not enough data

Genome context

9: 10514758-10514852 [+]

Mature cfa-miR-8841-5p

• Accession: MIMAT0051977
• Description: Canis lupus familiaris cfa-miR-8841-5p mature miRNA
• Sequence: 7 - UUCAGGGGUACUUGAAGG - 24
• Evidence: experimental ; Illumina [1]

Mature cfa-miR-8841-3p

• Accession: MIMAT0034334
• Description: Canis lupus familiaris cfa-miR-8841-3p mature miRNA
• Sequence: 65 - UCCUUAAGGAUCUCUGGAGGCU - 86
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545