Stem-loop cfa-mir-8842

Accession

MI0027928

Description

Canis familiaris cfa-mir-8842 precursor miRNA

Sequence

ggcgagcggcgcuucucccgUGCUGUGGCUCACGCUUUGGUACaggaggccgagacucuucuggcgacggcgaccucugcggcgacggcugaggcucucgg
..((((....(((((..(((((((((((....((((.(.((.(((((((.......))))))))).).))))....))))))).))))..))))).)))).

Structure

gg    cggc     uc    -       CUCA    U G  A       cc 
  cgag    gcuuc  ccgU GCUGUGG    CGCU U GU Caggagg  g
  ||||    |||||  |||| |||||||    |||| | || |||||||  a
  gcuc    cggag  ggca cggcguc    gcgg a cg gucuucu  g
-g    ---u     uc    g       ucca    c g  -       ca 

Annotation confidence Not enough data

Genome context

chr17: 51412614-51412714 [-]

Mature cfa-miR-8842

• Accession: MIMAT0034335
• Description: Canis familiaris cfa-miR-8842 mature miRNA
• Sequence: 21 - UGCUGUGGCUCACGCUUUGGUAC - 43
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545