miRBase entry: cfa-mir-8845

Stem-loop cfa-mir-8845


Accession
MI0027932
Description
Canis lupus familiaris cfa-mir-8845 precursor miRNA


Sequence

26 reads, 1.0 reads per million, 14 experiments
agaucuagaugccacaggaugcauccuccacauucUGCAAGGCAGGACCGACACCcucacccguggcuggcugugggucccuggcugccuugcgcugcuaacgaacccugggugugccucugugu
............((((((..((((.(.(((..(((((((((((((((((.(((.((...((...))..)).))).))))).....)))))))))........)))...)))).)))).)))))).

Structure
agaucuagaugc      au    c u   -ca   --------         -----     G   C  uca  c 
            cacagg  gcau c cca   uuc        UGCAAGGCA     GGACC ACA Cc   cc  
            ||||||  |||| | |||   |||        |||||||||     ||||| ||| ||   || g
            gugucu  cgug g ggu   aag        gcguuccgu     ccugg ugu gg   gg  
-----------u      -c    u -   ccc   caaucguc         cgguc     g   c  -uc  u 


Annotation confidence Not enough data
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Genome context
17: 13243814-13243938 [+]

Database links

Mature cfa-miR-8845-5p

Accession MIMAT0034339
Description Canis lupus familiaris cfa-miR-8845-5p mature miRNA
Sequence 36 - UGCAAGGCAGGACCGACACC - 55
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545