Stem-loop cfa-mir-8846

Accession

MI0027933

Description

Canis lupus familiaris cfa-mir-8846 precursor miRNA

Sequence

120 reads, 10.0 reads per million, 24 experiments

uucaaaccuaggagguucccaccaccuuaucacgccgcaauggccggacccugaggcuggcagguccuggcaggugcuggCGGGACAGAUGUGGCCUCAGAUCAUggccucuggaaggcuagugggguggaggcagcauccaccg
..........(((.(((.((.(((((((((...(((.((..(((((....(((((((((....((((((.(((...))).)))))).....)))))))))....)))))..))...)))..))))))))).)).))).)))....

Structure

uucaaaccua   g   c  a         cac   --g  au     gacc         -gcag      g   g 
          gga guu cc ccaccuuau   gcc   ca  ggccg    cugaggcug     guccug cag  
          ||| ||| || |||||||||   |||   ||  |||||    |||||||||     |||||| ||| u
          ccu cga gg gguggggug   cgg   gu  ccggU    GACUCCGGU     CAGGGC guc  
------gcca   a   c  a         -au   aag  cu     ACUA         GUAGA      g   g 

Annotation confidence Not enough data

Genome context

17: 7250859-7251003 [+]

Mature cfa-miR-8846-3p

• Accession: MIMAT0034340
• Description: Canis lupus familiaris cfa-miR-8846-3p mature miRNA
• Sequence: 81 - CGGGACAGAUGUGGCCUCAGAUCAU - 105
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545