Stem-loop cfa-mir-8849

Accession

MI0027940

Description

Canis familiaris cfa-mir-8849 precursor miRNA

Sequence

auugccgcguuggcuCCUUGGGAUUGGGACAUCGACGGGCccauugucccucggugccgcaucugaagcaggccccaggcgggguucggucgguu
...(((.((((((((.(((.((((..((.((((((.((((.....)))).))))))))..)))).)))..))))...)))).)))..........

Structure

-------auu   g    ---    -C   G    UG  A      C    c 
          gcc cguu   ggcu  CUU GGAU  GG CAUCGA GGGC c
          ||| ||||   ||||  ||| ||||  || |||||| |||| a
          ugg gcgg   ccgg  gaa ucua  cc guggcu ccug u
uuggcuggcu   g    acc    ac   g    cg  -      c    u 

Annotation confidence Not enough data

Genome context

chr16: 13954683-13954777 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from cfa-mir-8849

Mature cfa-miR-8849

• Accession: MIMAT0034344
• Description: Canis familiaris cfa-miR-8849 mature miRNA
• Sequence: 16 - CCUUGGGAUUGGGACAUCGACGGGC - 40
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545