Stem-loop cfa-mir-8852

Accession

MI0027943

Description

Canis familiaris cfa-mir-8852 precursor miRNA

Sequence

gggucuguacacacguguauguguauauguggagcaugugugcaaguguccaugucuguguaugucuaugcguguggauuUGCAUUCGUGUGGACUCUGUGCAUGccagugucuguacgugagugugugcaugugcguacaugua
.....(((((.(((((((((.....((((((.((((((((((((((.(((((((...(((((.((((((....)))))).)))))...))))))).)).)))))))..))).)).)))))).....))))))))).)))))....

Structure

ggguc     a         gugua      g  -   --       -  u       ucu     u      g 
     uguac cacguguau     uaugug ag cau  gugugca ag guccaug   gugua gucuau c
     ||||| |||||||||     |||||| || |||  ||||||| || |||||||   ||||| ||||||  
     acaug guguacgug     gugcau uc gug  cGUACGU UC CAGGUGU   UACGU uaggug g
-augu     c         uguga      g  u   ac       G  U       GCU     u      u 

Annotation confidence Not enough data

Genome context

chr16: 1148170-1148314 [-]

Mature cfa-miR-8852

• Accession: MIMAT0034347
• Description: Canis familiaris cfa-miR-8852 mature miRNA
• Sequence: 81 - UGCAUUCGUGUGGACUCUGUGCAUG - 105
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545