Stem-loop cfa-mir-8854

Accession

MI0027945

Description

Canis familiaris cfa-mir-8854 precursor miRNA

Sequence

gaaggagccacuacuccuaucagauauuugcacuucccuugauuaacugagagcuuccagcacagacagacaugggcuucUCCACUGUUGGGUGCCUGGGAUCUGaggccugugaggagggcagggcugucuggguguaagggca
......(((..(((.((((.(((...(((((.(((((.(((.....((.(((..(((((((((.(((((...(((......))))))))..))).))))))))).)).....))))))))))))).)))..)))).)))..))).

Structure

gaagga   ac   u    -u   aua     a     c   auuaa  g   gc      -   -a     aca   gc 
      gcc  uac ccua  cag   uuugc cuucc uug     cu aga  uuccag cac  gacag   ugg  u
      |||  ||| ||||  |||   ||||| ||||| |||     || |||  |||||| |||  |||||   |||   
      cgg  aug gggu  guc   ggacg ggagg agu     ga UCU  AGGGUC GUG  UUGUC   ACC  u
-----a   ga   u    cu   --g     -     -   guccg  G   --      C   GG     ---   Uc 

Annotation confidence Not enough data

Genome context

chr16: 23989851-23989995 [-]

Mature cfa-miR-8854

• Accession: MIMAT0034349
• Description: Canis familiaris cfa-miR-8854 mature miRNA
• Sequence: 81 - UCCACUGUUGGGUGCCUGGGAUCUG - 105
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545