Stem-loop cfa-mir-8857

Accession

MI0027948

Description

Canis familiaris cfa-mir-8857 precursor miRNA

Sequence

gacucugauagggaaggaauagagcccuuugaucugggcuuaguacaucuaaauggcuagaaguuaagucccuUAGCUUCUCCUUAUGUUUUGGGCcagaauaaguugcucucuuucccuuguuagagaag
..((((((((((((((((...((((..((((.(((((.(((((.((((......((..((((((((((...))))))))))))..)))).)))))))))).))))..)))))))))))).))))))))...

Structure

-ga        -        aua    cc    a     g     u    cuaaau  cu          u 
   cucugaua gggaagga   gagc  uuug ucugg cuuag acau      gg  agaaguuaag  
   |||||||| ||||||||   ||||  |||| ||||| ||||| ||||      ||  |||||||||| c
   gagauugu cccuuucu   cucg  gaau agacC GGGUU UGUA      CC  UCUUCGAUuc  
gaa        u        ---    uu    a     -     U    ----UU  --          c 

Annotation confidence Not enough data

Genome context

chr19: 13642448-13642578 [+]

Mature cfa-miR-8857

• Accession: MIMAT0034352
• Description: Canis familiaris cfa-miR-8857 mature miRNA
• Sequence: 74 - UAGCUUCUCCUUAUGUUUUGGGC - 96
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545