Stem-loop cfa-mir-8860

Accession

MI0027951

Description

Canis lupus familiaris cfa-mir-8860 precursor miRNA

Sequence

161 reads, 15.0 reads per million, 10 experiments

acaaugcccugugaggagccgggaguugcucccacucacuugugaccuguugcugugugagacgcaccuaaugucUACACUAGGUUUGGAGGAAAGUGGGaguguggugauccagguagaguaaaaaagccacca
.((((.(((.((.....)).))).))))((((((((..(((..((((((.....((((.(((((.......)))))))))))))))..)))...)))))))).(((((....................)))))..

Structure

-----acaaugcccugugaggagccgggaguug        -ca   gu      uugcu    g     ca 
                                 cucccacu   cuu  gaccug     gugu agacg  c
                                 ||||||||   |||  ||||||     |||| |||||  c
                                 gaGGGUGA   GAG  UUGGAU     CACA Ucugu  u
accaccgaaaaaaugagauggaccuaguggugu        AAG   GU      -----    -     aa 

Annotation confidence Not enough data

Genome context

18: 47848880-47849014 [-]

Mature cfa-miR-8860-3p

• Accession: MIMAT0034355
• Description: Canis lupus familiaris cfa-miR-8860-3p mature miRNA
• Sequence: 76 - UACACUAGGUUUGGAGGAAAGUGGG - 100
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545