Stem-loop cfa-mir-8861

Accession

MI0027952

Description

Canis lupus familiaris cfa-mir-8861 precursor miRNA

Sequence

11 reads, 0.0 reads per million, 7 experiments

ugaaccagccgacaguccagcuccuUUAGUGUCUGCUGCCCUUGCUGcugggaccugggcgacgggggcaagcgggcaguggggaggagacaggggacagucaagcccg
.......((.(((.((((..((((((((.(((((((((((((((.((((........)))).))))))).)))))))).))..)))))).....)))).)))..))...

Structure

ugaacca  -c   a    ---ag      --  G        -       C    ggg 
       gc  gac gucc     cuccuU  UA UGUCUGCU GCCCUUG UGcu   a
       ||  ||| ||||     ||||||  || |||||||| ||||||| ||||    
       cg  cug cagg     gaggag  gu acgggcga cgggggc gcgg   c
----gcc  aa   a    ggaca      gg  g        a       a    guc 

Annotation confidence Not enough data

Genome context

18: 44324355-44324463 [-]

Mature cfa-miR-8861-5p

• Accession: MIMAT0034356
• Description: Canis lupus familiaris cfa-miR-8861-5p mature miRNA
• Sequence: 26 - UUAGUGUCUGCUGCCCUUGCUG - 47
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545