Stem-loop cfa-mir-8859b

Accession

MI0027954

Description

Canis lupus familiaris cfa-mir-8859b precursor miRNA

Sequence

93905 reads, 419.0 reads per million, 82 experiments

ggggucggguUCCGCGCCUGGAGUCCGCCUCGugguucugaguccgGGUCGGAUUCCGUGCCUGGAGUccgcccc
((((.(((((((((.((.((((((((((((...((........))))).))))))))).)).)))))))))))))

Structure

    u         C  C         -   CGu  uuc 
gggg cggguUCCG GC UGGAGUCCG CCU   gg   u
|||| ||||||||| || ||||||||| |||   ||    
cccc gccUGAGGU CG GCCUUAGGC GGg   cc   g
    -         C  U         U   ---  uga 

Annotation confidence High

Genome context

18: 47370611-47370685 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from cfa-mir-8859b

Mature cfa-miR-8859b-5p

• Accession: MIMAT0051983
• Description: Canis lupus familiaris cfa-miR-8859b-5p mature miRNA
• Sequence: 11 - UCCGCGCCUGGAGUCCGCCUCG - 32
• Evidence: experimental ; Illumina [1]

Mature cfa-miR-8859b-3p

• Accession: MIMAT0034358
• Description: Canis lupus familiaris cfa-miR-8859b-3p mature miRNA
• Sequence: 47 - GGUCGGAUUCCGUGCCUGGAGU - 68
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545