Stem-loop cfa-mir-8862

Accession

MI0027955

Description

Canis familiaris cfa-mir-8862 precursor miRNA

Sequence

ccgccucccgcuucagccucccugcaccccgggcacagcuUGCUGAGCGUUGGCCGGUGGCCCUCcagucaccagaggccaccagaggccaggccugggcagugcucccaggggcuccugauguccacagcgggaggagcccccc
...(((((((((...((.((...((.(((.(((...((((((((.((..(((((((((((((((.........)).)))))))...))))))..)).))))).)))))).)))))....)).))....)))))))))........

Structure

-----ccg         -uca  c  -ccu  a   c   cac   -     G  CG      ---       -  Cca 
        ccucccgcu    gc uc    gc ccc ggg   agc uUGCU AG  UUGGCC   GGUGGCC CU   g
        |||||||||    || ||    || ||| |||   ||| ||||| ||  ||||||   ||||||| ||   u
        ggagggcga    ug ag    cg ggg ccc   ucg gacgg uc  gaccgg   ccaccgg ga   c
ccccccga         cacc  u  uccu  -   a   ---   u     g  cg      aga       a  cca 

Annotation confidence Not enough data

Genome context

chr16: 1101349-1101493 [-]

Mature cfa-miR-8862

• Accession: MIMAT0034359
• Description: Canis familiaris cfa-miR-8862 mature miRNA
• Sequence: 41 - UGCUGAGCGUUGGCCGGUGGCCCUC - 65
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545