miRBase entry: cfa-mir-8863

Stem-loop cfa-mir-8863


Accession
MI0027956
Description
Canis lupus familiaris cfa-mir-8863 precursor miRNA


Sequence

381 reads, 26.0 reads per million, 16 experiments
gggaugugcagccugcacuguagccUCCAGACCACCUGGGAGUUGGAGCgcagaccaaagcccgagcucucaguggcugcggggggcaggggggggcaggagugcccacagc
(((...(.(.((((.(.((((..(((((((.((((.((((((((((.((..........)))).))))))))))))))).)))).))))..).)))).).)...))).....

Structure
-----   aug g a    g -a    ag    -   A    C        -  A  gcag 
     ggg   u c gccu c  cugu  ccUC CAG CCAC UGGGAGUU GG GC    a
     |||   | | |||| |  ||||  |||| ||| |||| |||||||| || ||     
     ccc   a g cggg g  gacg  gggg guc ggug acucucga cc cg    c
cgaca   gug g a    g gg    -g    c   -    -        g  -  aaac 


Annotation confidence Not enough data
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Genome context
16: 15292754-15292865 [+]

Database links

Mature cfa-miR-8863-5p

Accession MIMAT0034360
Description Canis lupus familiaris cfa-miR-8863-5p mature miRNA
Sequence 26 - UCCAGACCACCUGGGAGUUGGAGC - 49
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545