Stem-loop cfa-mir-8867

Accession

MI0027960

Description

Canis lupus familiaris cfa-mir-8867 precursor miRNA

Sequence

6 reads, 1.0 reads per million, 5 experiments

ucugaagcgugcacaucuuguuuccuaggcccacugugauuugcucagagagaguuagggagaauguuggaagcacguUACUUAAUUCUCAGGAGUGAAACgagaaguaucuuggaggagggagacagccagccagagcuu
((((..((..((...((((.(((((((((...(((.((.(((((((...((((((((((...(((((.(....)))))).))))))))))..))))))).))...)))..))))).)))).))))..))..))))))....

Structure

----    aa  gu  aca    g    -     ccc   --g  a       aga          gag     u g 
    ucug  gc  gc   ucuu uuuc cuagg   acu   ug uuugcuc   gagaguuagg   aaugu g a
    ||||  ||  ||   |||| |||| |||||   |||   || |||||||   ||||||||||   ||||| |  
    agac  cg  cg   agag gagg gguuc   uga   gC AAGUGAG   CUCUUAAUUC   Uugca c a
uucg    --  ac  -ac    g    a     -ua   aga  A       -GA          --A     - g 

Annotation confidence Not enough data

Genome context

5: 32819303-32819443 [+]

Mature cfa-miR-8867-3p

• Accession: MIMAT0034364
• Description: Canis lupus familiaris cfa-miR-8867-3p mature miRNA
• Sequence: 79 - UACUUAAUUCUCAGGAGUGAAAC - 101
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545