Stem-loop cfa-mir-8868

Accession

MI0027961

Description

Canis lupus familiaris cfa-mir-8868 precursor miRNA

Sequence

14 reads, 2.0 reads per million, 7 experiments

ccugagucggauguaucuuaggacagagcccucugugcugCCCUGUGCUGUAGAAGCUUCCCUGCgggggaagagggcucccugcggaauaggcuugucaggagcagcucccagggcagcaagggguugauuucacacucagccu
((((((..........))))))(((((....)))))(((((((((.((((((.((((((..(((((((((........)))))))))...)))))).).....)))))...)))))))))...(((((((........)))))))

Structure

ccugagucggauguaucuuaggacagagcccucugu         --U     ----- G      -CC         aag 
                                    gcugCCCUG   GCUGU     A AAGCUU   CUGCggggg   a
                                    |||||||||   |||||     | ||||||   |||||||||    
                                    cgacgggac   cgacg     u uucgga   ggcgucccu   g
-----------uccgacucacacuuuaguuggggaa         ccu     aggac g      uaa         cgg 

Annotation confidence Not enough data

Genome context

5: 968944-969088 [-]

Mature cfa-miR-8868-3p

• Accession: MIMAT0034365
• Description: Canis lupus familiaris cfa-miR-8868-3p mature miRNA
• Sequence: 41 - CCCUGUGCUGUAGAAGCUUCCCUGC - 65
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545