Stem-loop cfa-mir-8872

Accession

MI0027965

Description

Canis familiaris cfa-mir-8872 precursor miRNA

Sequence

ggcggcgccgcguuagcuggUUCUGGGUUGUGGCGUCCGAGGAGCcgcgacgguuucugcccucgggccggcaacgcuugacuggccccugcggcggcccguagc
((.(.(((((((...(((((((..(.(((((.(.(((((((((((((...))))).....))))))))).))))).)..)))))))...))))))).))).....

Structure

-----  c g       uua       CU G     G C        -----     c 
     gg g cgccgcg   gcuggUU  G GUUGU G GUCCGAGG     AGCcg  
     || | |||||||   |||||||  | ||||| | ||||||||     ||||| g
     cc c gcggcgu   cggucag  c caacg c cgggcucc     uuggc  
cgaug  - g       ccc       uu g     g -        cgucu     a 

Annotation confidence Not enough data

Genome context

chr5: 41262556-41262660 [-]

Mature cfa-miR-8872

• Accession: MIMAT0034369
• Description: Canis familiaris cfa-miR-8872 mature miRNA
• Sequence: 21 - UUCUGGGUUGUGGCGUCCGAGGAGC - 45
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545