miRBase entry: cfa-mir-8874

Stem-loop cfa-mir-8874


Accession
MI0027970
Description
Canis lupus familiaris cfa-mir-8874 precursor miRNA


Sequence

261 reads, 11.0 reads per million, 15 experiments
ucuuaguaucugugugacugCACUUCUCUGAGCCUCCCUUUCCAcaucugugcaguggggcuguggggagggcucaaggaagcacugggggucggaggucagc
.....(.((((.((...((.(((((((.(((((((((((((((((.........))))))....))))).)))))).)))))...)).))..)).)))))...

Structure
ucuua u    g  uga  g  ---     C      -     ----      auc 
     g aucu ug   cu CA   CUUCU UGAGCC UCCCU    UUCCAc   u
     | |||| ||   || ||   ||||| |||||| |||||    ||||||   g
     c ugga gc   gg gu   gaagg acucgg agggg    ggggug   u
--cga -    g  -ug  g  cac     a      g     uguc      acg 


Annotation confidence Not enough data
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Genome context
6: 31567616-31567718 [-]

Database links

Mature cfa-miR-8874-5p

Accession MIMAT0034374
Description Canis lupus familiaris cfa-miR-8874-5p mature miRNA
Sequence 21 - CACUUCUCUGAGCCUCCCUUUCCA - 44
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545