Stem-loop cfa-mir-8878

Accession

MI0027974

Description

Canis familiaris cfa-mir-8878 precursor miRNA

Sequence

uuggguccccagggacuuagagucuUCGUGACGGUGACCAGACCUUGCAGaaccgcuccgaggcccugagguggccugucaucagccuggacuugucuuccucucuguggggaug
....(((((((((((....((((((..((((((((.(((((.(((((.((.....)).)))))..))..))).))).)))))......))))))....)))).....))))))).

Structure

uugg       -----    cuua      ----UC     -   G   --  -A     C  a 
    gucccca     ggga    gagucu      GUGAC GGU ACC  AG  CCUUG AG a
    |||||||     ||||    ||||||      ||||| ||| |||  ||  ||||| || c
    uaggggu     uccu    uucagg      uacug ccg ugg  uc  ggagc uc c
---g       gucuc    ucug      uccgac     u   g   ag  cc     c  g 

Annotation confidence Not enough data

Genome context

chr6: 21119782-21119896 [+]

Mature cfa-miR-8878

• Accession: MIMAT0034378
• Description: Canis familiaris cfa-miR-8878 mature miRNA
• Sequence: 26 - UCGUGACGGUGACCAGACCUUGCAG - 50
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545