Stem-loop cfa-mir-8882

Accession

MI0027981

Description

Canis familiaris cfa-mir-8882 precursor miRNA

Sequence

cugucgcucuguuuucugggcgcuuguacccuacggccucUCCGAGCUCUGACUCCCUUCCCUGGgaaagagcaccaggaacaggguagcagguuugagguacccgggcuggacucguggaggugcucagcaaacugaggaaggg
((.((.(((.((((.((((((((((.(((....((((((((.(((((.(((.((((((..(((((.........)))))...)))).)))))))))).)).....)))))).....))).)))))))))).)))).))))).)).

Structure

-  g  g   u    u          g   -ccua      -----  C     U   A  -    -UC     gaa 
 cu uc cuc guuu cugggcgcuu uac     cggccu     cU CGAGC CUG CU CCCU   CCUGG   a
 || || ||| |||| |||||||||| |||     ||||||     || ||||| ||| || ||||   |||||   g
 gg ag gag caaa gacucgugga gug     gucggg     gg guuug gac ga ggga   ggacc   a
g  a  -   u    c          g   cucag      cccau  a     -   -  u    caa     acg 

Annotation confidence Not enough data

Genome context

chr8: 70657032-70657176 [-]

Mature cfa-miR-8882

• Accession: MIMAT0034384
• Description: Canis familiaris cfa-miR-8882 mature miRNA
• Sequence: 41 - UCCGAGCUCUGACUCCCUUCCCUGG - 65
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545