Stem-loop cfa-mir-8884

Accession

MI0027983

Description

Canis lupus familiaris cfa-mir-8884 precursor miRNA

Sequence

96230 reads, 68.0 reads per million, 82 experiments

ugaacugauggacacaccuggggucauCCCUGAGCGGAGCCAGGUccaucaaaaccaggauguugacaguggUUUGAUGGAUUUGCUUAGCACCcgagguggccccuugccucuuuguuuaaaaaaaug
(((((....(((..((...((((((((((....((.((((.((((((((((((.(((............))))))))))))))))))).))....).))))))))).))..)))..)))))........

Structure

--------     ugau   ca  ccu         - CUGA  G    C            a   ggaug 
        ugaac    gga  ca   ggggucauC C    GC GAGC AGGUccaucaaa cca     u
        |||||    |||  ||   ||||||||| |    || |||| |||||||||||| |||      
        auuug    ucu  gu   ccccggugg g    CG UUCG UUUAGGUAGUUU ggu     u
guaaaaaa     --uu   cc  --u         a cCCA  A    -            -   gacag 

Annotation confidence Not enough data

Genome context

8: 54054416-54054544 [-]

Mature cfa-miR-8884-5p

• Accession: MIMAT0051989
• Description: Canis lupus familiaris cfa-miR-8884-5p mature miRNA
• Sequence: 28 - CCCUGAGCGGAGCCAGGU - 45
• Evidence: experimental ; Illumina [1]

Mature cfa-miR-8884-3p

• Accession: MIMAT0034386
• Description: Canis lupus familiaris cfa-miR-8884-3p mature miRNA
• Sequence: 73 - UUUGAUGGAUUUGCUUAGCACC - 94
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545