Stem-loop cfa-mir-8886

Accession

MI0027988

Description

Canis familiaris cfa-mir-8886 precursor miRNA

Sequence

cacagcuacgguuccaggagcuugagguggaagaugcccaUCCCAGGACAUGAGUGUAGGACACAgaccagugcuguccaagcacguauucugaugggccacagggcguucuccacaacucuguucauauacauaaagauggcca
....(((((........((((..((((((((.(((((((..(((((((.(((.((((.(((((((......)).)))))..)))).))))))..)))).....))))))).)))))..))).))))...........).))))..

Structure

caca    - ---gguuccag    uu   --     a       ---aU    --   C   A    -A     -  ga 
    gcua c           gagc  gag  gugga gaugccc     CCCA  GGA AUG GUGU  GGACA CA  c
    |||| |           ||||  |||  ||||| |||||||     ||||  ||| ||| ||||  ||||| ||   
    cggu g           cuug  cuc  caccu uugcggg     gggu  ucu uau cacg  ccugu gu  c
--ac    a aaauacauaua    -u   aa     c       acacc    ag   -   g    aa     c  ga 

Annotation confidence Not enough data

Genome context

chr9: 4378704-4378848 [+]

Mature cfa-miR-8886

• Accession: MIMAT0034390
• Description: Canis familiaris cfa-miR-8886 mature miRNA
• Sequence: 41 - UCCCAGGACAUGAGUGUAGGACACA - 65
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545