Stem-loop cfa-mir-8887

Accession

MI0027989

Description

Canis familiaris cfa-mir-8887 precursor miRNA

Sequence

cuuggaagcucuuggaccagagggugcuugUCCUGCCAUGGCAUUCCGGAGgacugagggcauguccaugauccaggcacuggccaugacgguggccgagaucccuguguuccugua
.............(((.((.((((..(((((((((.((((((...(((((((((((....)).))))....))).)).....)))))).))).)).))))..)))).)).)))....

Structure

cuuggaagcucuu   c  g    ug    -  -   C      --AUU  -   ----    -  a 
             gga ca aggg  cuug UC CUG CAUGGC     CC GGA    Ggac ug g
             ||| || ||||  |||| || ||| ||||||     || |||    |||| ||  
             ccu gu uccc  gagc gg ggc guaccg     gg ccu    ccug ac g
---------augu   u  g    ua    c  u   a      gucac  a   agua    u  g 

Annotation confidence Not enough data

Genome context

chr9: 54627793-54627909 [-]

Mature cfa-miR-8887

• Accession: MIMAT0034391
• Description: Canis familiaris cfa-miR-8887 mature miRNA
• Sequence: 31 - UCCUGCCAUGGCAUUCCGGAG - 51
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545