Stem-loop cfa-mir-8889

Accession

MI0027992

Description

Canis familiaris cfa-mir-8889 precursor miRNA

Sequence

uccugacguuggggccugagaggcaguucugaggacagcagaccugaccugggccugcagcuuauggguuccUGCGCUGGGUCCCAGCAGGUCAgcuggacccuggccucuggcccccugaugccaggu
.((((.((((((((((..((((((......(.(..((((.((((((..(((((((..((((.((.((...)))).)))))).))))))))))).))))..).)..))))))))))))..)))).)))).

Structure

u    a    --      ug      aguucu a ga    a      ac     -  ug    u  u  g 
 ccug cguu  ggggcc  agaggc      g g  cagc gaccug  cuggg cc  cagc ua gg  
 |||| ||||  ||||||  ||||||      | |  |||| ||||||  ||||| ||  |||| || || u
 ggac guag  ccccgg  ucuccg      c c  gucg CUGGAC  GACCC GG  GUCG GU cc  
u    c    uc      --      ----gu c ag    A      --     U  --    C  -  u 

Annotation confidence Not enough data

Genome context

chr9: 47791955-47792083 [-]

Mature cfa-miR-8889

• Accession: MIMAT0034394
• Description: Canis familiaris cfa-miR-8889 mature miRNA
• Sequence: 73 - UGCGCUGGGUCCCAGCAGGUCA - 94
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545