Stem-loop cfa-mir-8898

Accession

MI0028009

Description

Canis familiaris cfa-mir-8898 precursor miRNA

Sequence

guggagagcauggucaccucucggugacuugagauagggugcugcuggccugccuuuuccccagagcuccagaugggccUCAGGACAGUUGGUAGCAGCUCCCuacugguccagagagccaggcuggccgugguccggccccg
((.(.((.((((((((((((((.(.((((..((.(((((.(((((((.(((((((....((((..........))))....))).)))..).))))))).)))))))))))).))))....)).)))))))).))).))....

Structure

----  g a  g        -  ----    g u    ug  a     u       g --   -   uuuc    gagc 
    gu g ga caugguca cc    ucuc g gacu  ag uaggg gcugcug c  cug ccu    ccca    u
    || | || |||||||| ||    |||| | ||||  || ||||| ||||||| |  ||| |||    ||||     
    cg c cu gugccggu gg    agag c cugg  uc auCCC CGACGAU G  GAC GGA    gggu    c
gccc  g -  g        c  accg    a -    --  -     U       G UU   A   CUcc    agac 

Annotation confidence Not enough data

Genome context

chr3: 54657737-54657879 [-]

Mature cfa-miR-8898

• Accession: MIMAT0034408
• Description: Canis familiaris cfa-miR-8898 mature miRNA
• Sequence: 80 - UCAGGACAGUUGGUAGCAGCUCCC - 103
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545