Stem-loop cfa-mir-8902

Accession

MI0028013

Description

Canis lupus familiaris cfa-mir-8902 precursor miRNA

Sequence

263 reads, 3.0 reads per million, 26 experiments

accuuuugcuuuugacuucaCAUCCAUUUCUUUCACCUGGGGaaaauucuggagccCCAGGAGAGGAAAUGGAAGUGaggugagagcagcaccuccagucugugu
......(((((((.(((((((.(((((((((((..(((((((............))))))).))))))))))).))))))))))))))((((.........))))

Structure

-----------accuuu       g       A           CA       aaaau 
                 ugcuuuu acuucaC UCCAUUUCUUU  CCUGGGG     u
                 ||||||| ||||||| |||||||||||  |||||||      
                 acgagag uggaGUG AGGUAAAGGAG  GGACCcc     c
ugugucugaccuccacg       -       A           -A       gaggu 

Annotation confidence High

Genome context

4: 50909607-50909711 [+]

Mature cfa-miR-8902-5p

• Accession: MIMAT0034412
• Description: Canis lupus familiaris cfa-miR-8902-5p mature miRNA
• Sequence: 21 - CAUCCAUUUCUUUCACCUGGGG - 42
• Evidence: experimental ; Illumina [1]

Mature cfa-miR-8902-3p

• Accession: MIMAT0052000
• Description: Canis lupus familiaris cfa-miR-8902-3p mature miRNA
• Sequence: 57 - CCAGGAGAGGAAAUGGAAGUG - 77
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545