Stem-loop cfa-mir-8908d-3

Accession

MI0028022

Description

Canis familiaris cfa-mir-8908d-3 precursor miRNA

Sequence

ccuccucugcaggccacgcugaguuuggggcccuacccagaaaggugcugauaaggcaggauacagauuAUUAGCGCCUGACUGAGUGGGGUCccgaucaguaauauaacuaccuguggcgac
............((((((((((..((((((((((((.(((..((((((((((((....(....)...))))))))))))..))).))))))))))))))))).............)))))...

Structure

ccuccucugcag     -------------     gu            c   aa            ggca g 
            gccac             gcuga  uuggggcccuac cag  aggugcugauaa    g a
            |||||             |||||  |||||||||||| |||  ||||||||||||    |  
            cggug             ugacu  agccCUGGGGUG GUC  UCCGCGAUUAuu    c u
---------cag     uccaucaauauaa     --            A   AG            -aga a 

Annotation confidence Not enough data

Genome context

chrX: 114686137-114686259 [-]

Clustered miRNAs

8 other miRNAs are < 10 kb from cfa-mir-8908d-3

Mature cfa-miR-8908d

• Accession: MIMAT0034420
• Description: Canis familiaris cfa-miR-8908d mature miRNA
• Sequence: 70 - AUUAGCGCCUGACUGAGUGGGGUC - 93
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545