Stem-loop cfa-mir-8791b

Accession

MI0028032

Description

Canis familiaris cfa-mir-8791b precursor miRNA

Sequence

ccugaucuguucagcucggggccgccuggaggcuggggugUUCUUGCUGUCCUGUGCCCUCCUGGcuucugccuguuccagggggagcgccggauauugggcuguuuccggcacccugugcccccgggccugcacuguuggaauc
.(((((..((.((((((((((.(((..((..(((((((.((((....(((((.((((((((((((...(.....)..)))))))).)))).)))))..))))...)))))))..)).))).))))))).))).)).)))))....

Structure

---c     cu  u   -       c   cu  ag       --u    UUGC     U    -        cuu u 
    cugau  gu cag cucgggg cgc  gg  gcugggg   gUUC    UGUCC GUGC CCUCCUGG   c g
    |||||  || ||| ||||||| |||  ||  |||||||   ||||    ||||| |||| ||||||||   | c
    gguug  ca guc gggcccc gug  cc  cggccuu   cggg    auagg cgcg gggggacc   g c
cuaa     -u  c   c       c   -u  ca       ugu    --uu     c    a        -uu u 

Annotation confidence Not enough data

Genome context

chrX: 43758547-43758691 [+]

Mature cfa-miR-8791b

• Accession: MIMAT0034430
• Description: Canis familiaris cfa-miR-8791b mature miRNA
• Sequence: 41 - UUCUUGCUGUCCUGUGCCCUCCUGG - 65
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545