Accession
MI0028034
Description
Canis lupus familiaris
cfa-mir-8908a-2 precursor miRNA
Sequence
17290
reads,
79.0
reads per million, 63 experiments
cccuggacaacauccgucuucccgcguaacguguguagugcucUGCUGAGGAAGGUGCUGGUUGCauucauucauaagaguAAUUAGGACCUCCCUGAGCGGAguaaugcucaccugaaggacgucugcagugucauccggagcg
..(((((..((((.((((((.(.(......(((.(((.(((((((((.(((.((((.((((((((..((........)))))))))).)))).))).))))))))).))).)))).).))))))......))))..)))))....
..(((((..((((.((((((.(.(......(((.(((.(((((((((.(((.((((.((((((((..((........)))))))))).)))).))).))))))))).))).)))).).))))))......))))..)))))....
Structure
--cc ca -----c c c cguaac u g G A G au auu
cugga acau cgucuu c g gug gua ugcucUGCU AGG AGGU CUGGUUGC uc c
||||| |||| |||||| | | ||| ||| ||||||||| ||| |||| |||||||| ||
ggccu ugug gcagga g c cac cgu augAGGCGA UCC UCCA GAUUAAug ag a
gcga ac acgucu a u ------ u a G C G -- aau
Annotation confidence
High
Do you think this miRNA is real?
Genome context
X: 116734840-116734984 [-]
Clustered miRNAs
6 other miRNAs are < 10 kb from cfa-mir-8908a-2
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature cfa-miR-8908a-2-5p
| Accession | MIMAT0052013 |
| Description | Canis lupus familiaris cfa-miR-8908a-2-5p mature miRNA |
| Sequence | 44 - UGCUGAGGAAGGUGCUGGUUGC - 65 |
| Evidence |
experimental
Illumina [1] |
Mature cfa-miR-8908a-3p
| Accession | MIMAT0034429 |
| Description | Canis lupus familiaris cfa-miR-8908a-3p mature miRNA |
| Sequence | 82 - AAUUAGGACCUCCCUGAGCGGA - 103 |
| Evidence |
experimental
Illumina [1] |
References
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