miRBase entry: cfa-mir-8907

Stem-loop cfa-mir-8907

Accession

MI0028042

Description

Canis familiaris cfa-mir-8907 precursor miRNA

Sequence

gucaaagagcauuccagguggagggaauagagaggUGCCGAUUCUGAAGUGGGAAGAuguugggguguuggcuucacugagcagggccacuguggcugugacccuugcaugagggaacgagggcuuuau
.....((((((((((........)))))..((.((.(((((((((.((...........)).))).)))))).)).))...((.(((((...))))).)).(((((....))))).......)))))..

Structure

gucaa     ------------------------auuccagguggagggaauag  a  U      -   G  GUGG 
     agagc                                            ag gg GCCGAU UCU AA    G
     |||||                                            || || |||||| ||| ||    A
     uuucg                                            uc cu cgguug ggg uu    A
---ua     ggagcaagggaguacguucccagugucggugucaccgggacgag  a  u      u   g  guAG

Annotation confidence Not enough data

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Genome context

chr16: 10437283-10437411 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from cfa-mir-8907

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature cfa-miR-8907

Accession	MIMAT0034435
Description	Canis familiaris cfa-miR-8907 mature miRNA
Sequence	36 - UGCCGAUUCUGAAGUGGGAAGA - 57
Evidence	experimental Illumina [1]

References

PubMed ID: 24692655
Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
"Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
"Mol Biol Evol (2014) 31:1536-1545