Stem-loop eca-mir-8909

Accession

MI0028044

Description

Equus caballus eca-mir-8909 precursor miRNA

Sequence

2049 reads, 310 reads per million, 1 experiments

aaaucucacgcuccaCCUGAAAUUCUGAUGCACCUCUCaggucgggggggagaccuccccaccgcgugacgaggcaccaugaugcucagga
...............(((((.(((.((.(((..((((((.(.(((.(((((....))))).)))).))).)))))).)).)))..))))).

Structure

aaaucucacgcucca     -A   C  A   AC   -   g u   g     g 
               CCUGA  AUU UG UGC  CUC UCa g cgg gggga a
               |||||  ||| || |||  ||| ||| | ||| |||||  
               ggacu  uag ac acg  gag agu c gcc ccccu c
--------------a     cg   u  c   --   c   g -   a     c 

Annotation confidence Not enough data

Genome context

chr20: 34212987-34213077 [+]

Mature eca-miR-8909

• Accession: MIMAT0034437
• Description: Equus caballus eca-miR-8909 mature miRNA
• Sequence: 16 - CCUGAAAUUCUGAUGCACCUCUC - 38
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545