Stem-loop eca-mir-8913

Accession

MI0028048

Description

Equus caballus eca-mir-8913 precursor miRNA

Sequence

5 reads, 1 reads per million, 1 experiments

gguagaguuggccgauggaggcacuggaggaaggcuagagguugggaggaggggagaagccagguauuucUUCCUCAUUUUCUGCUUCAAGUGGUgucucuugucagcuccugagccuccucugu
(((.((((((((....((((((((((...((((.(.(((((....((((((((((...........))))))))))..))))))))))...)))))))))).))))))))....)))........

Structure

--------   ---a        cgau          gag    g u     uugg          gaag 
        ggu    gaguuggc    ggaggcacug   gaag c agagg    gaggagggga    c
        |||    ||||||||    ||||||||||   |||| | |||||    ||||||||||    c
        ccg    cucgacug    ucucugUGGU   CUUC G UCUUU    CUCCUUcuuu    a
ugucuccu   aguc        ---u          GAA    - -     --UA          augg 

Annotation confidence Not enough data

Genome context

chr20: 39845361-39845485 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from eca-mir-8913

Mature eca-miR-8913

• Accession: MIMAT0034441
• Description: Equus caballus eca-miR-8913 mature miRNA
• Sequence: 71 - UUCCUCAUUUUCUGCUUCAAGUGGU - 95
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545