Stem-loop eca-mir-8914

Accession

MI0028049

Description

Equus caballus eca-mir-8914 precursor miRNA

Sequence

5 reads, 1 reads per million, 1 experiments

gggugaagaagcggagcucucgggacagaaggccaggcuuUUUGAGCUGUGUUGGUUGUCACGguuccuguuucgugaaccacaagcagcucaacaaacuguggucuguguucucuccuaaaacccuuugcacuucccacu
.((.((((..((((((.....((((.(((((((((.(.((((((((((((..((((..((((((........))))))))))...))))))))).))).).))))))....))).))))......)))))).))))))...

Structure

--g  u    aa      -cucuc    c   ----      g c   -         -GU    UG      uuc 
   gg gaag  gcggag      ggga aga    aggcca g uuU UUGAGCUGU   UGGU  UCACGg   c
   || ||||  ||||||      |||| |||    |||||| | ||| |||||||||   ||||  ||||||    
   cc cuuc  cguuuc      uccu ucu    ucuggu u aaa aacucgacg   acca  agugcu   u
uca  -    -a      ccaaaa    c   ugug      g c   c         aac    --      uug 

Annotation confidence Not enough data

Genome context

chr20: 15497687-15497827 [-]

Mature eca-miR-8914

• Accession: MIMAT0034442
• Description: Equus caballus eca-miR-8914 mature miRNA
• Sequence: 41 - UUUGAGCUGUGUUGGUUGUCACG - 63
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545