Stem-loop eca-mir-8918

Accession

MI0028053

Description

Equus caballus eca-mir-8918 precursor miRNA

Sequence

4 reads, 1 reads per million, 1 experiments

uacuaagugucccccacuggagcucUAGACUCUGCCUUGUGCCACCAaguucucuacucacuugggcccgaagcacaugcagagacuggcaagguacccguuggagaag
.........((.((.((.((.(((((((.((((((..(((((..((((((.........)))))).......))))).)))))).))))...))).)).)).)).))..

Structure

uacuaagug  c  c  u  a   ---    A      CU     -----CA      ucu 
         uc cc ac gg gcu   cUAG CUCUGC  UGUGC       CCAagu   c
         || || || || |||   |||| ||||||  |||||       ||||||   u
         ag gg ug cc ugg   gguc gagacg  acacg       gguuca   a
-------ga  a  u  c  a   aac    a      -u     aagcccg      cuc 

Annotation confidence Not enough data

Genome context

chr20: 43101757-43101865 [-]

Mature eca-miR-8918

• Accession: MIMAT0034446
• Description: Equus caballus eca-miR-8918 mature miRNA
• Sequence: 26 - UAGACUCUGCCUUGUGCCACCA - 47
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545