Stem-loop eca-mir-8921-1

Accession

MI0028056

Description

Equus caballus eca-mir-8921-1 precursor miRNA

Sequence

111 reads, 8 reads per million, 1 experiments

caguaggcugaggccUAGGAGUCUGUAUUUUCGUCAGCUGcacaggugguuuuuaggcagcuggucuggacagcacgguucccugugccgccugc
..((((((...((((..((((.((((...((((((((((((..(((.....)))..))))))))..))))....))))))))..).)))))))))

Structure

ca      uga   - UA    U    -AUU    --        ac   u 
  guaggc   ggc c  GGAG CUGU    UUCG  UCAGCUGc  agg g
  ||||||   ||| |  |||| ||||    ||||  ||||||||  ||| g
  cguccg   ccg g  ccuu ggca    aggu  ggucgacg  uuu u
--      ---   u uc    -    cgac    cu        ga   u 

Annotation confidence Not enough data

Genome context

NW_001868953.1: 42619-42713 [+]

Mature eca-miR-8921

• Accession: MIMAT0034449
• Description: Equus caballus eca-miR-8921 mature miRNA
• Sequence: 16 - UAGGAGUCUGUAUUUUCGUCAGCUG - 40
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545