Stem-loop eca-mir-8924-1

Accession

MI0028059

Description

Equus caballus eca-mir-8924-1 precursor miRNA

Sequence

40 reads, 5 reads per million, 1 experiments

gccuggggccuggacgaggguuuuccccggguucuucggagcucugaggucaccgUGGGACUCGGGUGGAGGCUCUCCUGcggucaccuggggcc
((((.(((.(((.(.((((((((((((((((((((.(((.(((....)))..))).)))))))))).)))))))))).).)))...))).)))).

Structure

-    g   --c   g c          -          u   -a   c 
 gccu ggg   cug a gaggguuuuc cccggguucu cgg  gcu u
 |||| |||   ||| | |||||||||| |||||||||| |||  |||  
 cggg ucc   ggc U CUCUCGGAGG GGGCUCAGGG gcc  ugg g
c    g   acu   G C          U          U   ac   a 

Annotation confidence Not enough data

Genome context

chr9: 29287001-29287095 [-]

Mature eca-miR-8924

• Accession: MIMAT0034452
• Description: Equus caballus eca-miR-8924 mature miRNA
• Sequence: 56 - UGGGACUCGGGUGGAGGCUCUCCUG - 80
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545