Stem-loop eca-mir-8930

Accession

MI0028066

Description

Equus caballus eca-mir-8930 precursor miRNA

Sequence

7 reads, 1 reads per million, 1 experiments

cuaguggugaugcugguuacagcugggaccucggcuggggugucaggcagaacacuuccuauaugugaucUCUCCAUCUGGGCUAGUUUGGGCUUccaaacuagcauggcacuaggucuugagac
((((((.(.(((((((((..((((.((((...((((.(((((...((.(((.(((.........))).))))).))))).)))).)))).))))....))))))))).)))))))..........

Structure

----------      g g         --ac    g    cuc    g     uca  c   a   uuc 
          cuagug u augcugguu    agcu ggac   ggcu gggug   gg aga cac   c
          |||||| | |||||||||    |||| ||||   |||| |||||   || ||| |||   u
          gaucac g uacgaucaa    UCGG UUUG   UCGG UCUAC   UC Ucu gug   a
cagaguucug      - g         accU    G    --A    G     --C  -   a   uau 

Annotation confidence Not enough data

Genome context

NW_001867699.1: 77594-77718 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from eca-mir-8930

Mature eca-miR-8930

• Accession: MIMAT0034458
• Description: Equus caballus eca-miR-8930 mature miRNA
• Sequence: 71 - UCUCCAUCUGGGCUAGUUUGGGCUU - 95
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545