Stem-loop eca-mir-8931

Accession

MI0028067

Description

Equus caballus eca-mir-8931 precursor miRNA

Sequence

78 reads, 17.0 reads per million, 6 experiments

aggcucccaggagaugggcaguuugaggcuggauucugggccuacccuggucaucucaggggCCUGGGUGGGAAGACCCCUCUGugcccacucucaccucagagcagcc
..((((..((((((((((((....((((..((..(((...(((((((.((((........)))).))))))).)))))))))..)))))).)))..)))..))))....

Structure

--ag    cc   --   -      guuu    cu  au   ggg       u    auc 
    gcuc  agg  aga ugggca    gagg  gg  ucu   ccuaccc gguc   u
    ||||  |||  ||| ||||||    ||||  ||  |||   ||||||| ||||    
    cgag  ucc  ucu acccgu    CUCC  CC  AGA   GGGUGGG CCgg   c
ccga    ac   ac   c      --GU    --  --   --A       U    gga 

Annotation confidence Not enough data

Genome context

gb|PJAA01002371.1|: 1688-1796 [-]

Mature eca-miR-8931-3p

• Accession: MIMAT0034459
• Description: Equus caballus eca-miR-8931-3p mature miRNA
• Sequence: 63 - CCUGGGUGGGAAGACCCCUCUG - 84
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545