Stem-loop eca-mir-8938

Accession

MI0028078

Description

Equus caballus eca-mir-8938 precursor miRNA

Sequence

2 reads, 0 reads per million, 1 experiments

accuucaccuucguuggcgguuccuUUGCGUUCUGGCGGCUGCUGCUUCCugcggguugcgggccccaagggggcgcugcugucacccaggguggggggauggcgggcgcggguu
......((((.((((.((.((((((((((.((.(((((((.((.(((((((..(((((...)))))..))))))))).)))))))...)).)))))))))).)).)))).)))).

Structure

accuuc    u    g  g          G  --C       U  U       gc     g 
      accu cguu gc guuccuUUGC UU   UGGCGGC GC GCUUCCu  ggguu  
      |||| |||| || |||||||||| ||   ||||||| || |||||||  ||||| c
      uggg gcgg cg uaggggggug ga   acugucg cg cggggga  cccgg  
-----u    c    g  g          g  ccc       u  -       ac     g 

Annotation confidence Not enough data

Genome context

NW_001876463.1: 156417-156531 [-]

Mature eca-miR-8938

• Accession: MIMAT0034467
• Description: Equus caballus eca-miR-8938 mature miRNA
• Sequence: 26 - UUGCGUUCUGGCGGCUGCUGCUUCC - 50
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545