Stem-loop eca-mir-8927-2

Accession

MI0028087

Description

Equus caballus eca-mir-8927-2 precursor miRNA

Sequence

2 reads, 0 reads per million, 1 experiments

agagccuccaugauuccagcuuccugcugggaaugaggauggggagugugauguaagaacuguuuucccagguaaagaacUCUGGCAACAUUCUGCAGUCCCUGGaaaagcuguguucccuucagggguguggauuugugugcau
...((...(((((.((((..((((((..((((((.((..((((((.(((......((((.((((...((((((.....)).)))).))))))))))).))))))......))..))))))..))))))..)))).))))).))..

Structure

aga  cuc     u    gc      cu      -g  ----ga      g   gaugua    c    uuc    -  a 
   gc   cauga ucca  uuccug  gggaau  ag      ugggga ugu      agaa uguu   ccag gu a
   ||   ||||| ||||  ||||||  ||||||  ||      |||||| |||      |||| ||||   |||| || a
   cg   guguu aggu  ggggac  cccuug  uc      GUCCCU ACG      UCUU ACAA   GGUC ca g
-ua  --u     u    gu      uu      ug  gaaaaG      G   ------    -    --C    U  a 

Annotation confidence Not enough data

Genome context

NW_001871043.1: 3655-3799 [+]

Mature eca-miR-8927

• Accession: MIMAT0034455
• Description: Equus caballus eca-miR-8927 mature miRNA
• Sequence: 81 - UCUGGCAACAUUCUGCAGUCCCUGG - 105
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545